Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
CSS0049287.g
View in Genome Browser
Position
Chr4:28748381-28751795 (+)
3414bp
Gene Type
gene
Gene Description (Protein Product)
Transport inhibitor response 1-like
Organism
Camellia sinensis
Also AS AT5G49980

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
CSS0050481.g Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
CSS0049449.g Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
CSS0049991.g Transcription factor
Regulatory gene
CSS0000128.g tesmin tso1-like cxc
CSS0004360.g Dof zinc finger protein
CSS0004951.g dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000151 ubiquitin ligase complex CC
GO:0000822 inositol hexakisphosphate binding MF
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0008144 obsolete drug binding MF
GO:0008150 biological_process BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009733 response to auxin BP
GO:0009734 auxin-activated signaling pathway BP
GO:0009755 hormone-mediated signaling pathway BP
GO:0009987 cellular process BP
GO:0010011 auxin binding MF
GO:0010033 response to organic substance BP
GO:0019005 SCF ubiquitin ligase complex CC
GO:0023052 signaling BP
GO:0031461 cullin-RING ubiquitin ligase complex CC
GO:0032870 cellular response to hormone stimulus BP
GO:0032991 protein-containing complex CC
GO:0036094 small molecule binding MF
GO:0042221 response to chemical BP
GO:0042562 hormone binding MF
GO:0043167 ion binding MF
GO:0043168 anion binding MF
GO:0043178 alcohol binding MF
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051716 cellular response to stimulus BP
GO:0065007 biological regulation BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071310 cellular response to organic substance BP
GO:0071365 cellular response to auxin stimulus BP
GO:0071495 cellular response to endogenous stimulus BP
GO:1902494 catalytic complex CC
GO:1990234 transferase complex CC