PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	CSS0050119.g View in Genome Browser
Position	Chr7:95713798-95723367 (+) 9569bp
Gene Type	gene
Gene Description (Protein Product)	Malate dehydrogenase
Organism	Camellia sinensis
Also AS	AT5G58330

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	CSS0050326.g lactate/malate dehydrogenase, alpha/beta C-terminal domain CSS0050211.g Malate dehydrogenase CSS0050192.g Lactoylglutathione lyase
Regulatory gene	CSS0000305.g Zinc finger protein CSS0001087.g ZINC FINGER protein CSS0002339.g zinc finger

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005575	cellular_component	CC
GO:0005576	extracellular region	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005739	mitochondrion	CC
GO:0006082	organic acid metabolic process	BP
GO:0006091	generation of precursor metabolites and energy	BP
GO:0006099	tricarboxylic acid cycle	BP
GO:0006101	citrate metabolic process	BP
GO:0006107	oxaloacetate metabolic process	BP
GO:0006108	malate metabolic process	BP
GO:0006139	nucleobase-containing compound metabolic process	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006732	obsolete coenzyme metabolic process	BP
GO:0006733	obsolete oxidoreduction coenzyme metabolic process	BP
GO:0006734	NADH metabolic process	BP
GO:0006753	nucleoside phosphate metabolic process	BP
GO:0006793	phosphorus metabolic process	BP
GO:0006796	phosphate-containing compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008746	NAD(P)+ transhydrogenase activity	MF
GO:0009060	aerobic respiration	BP
GO:0009117	nucleotide metabolic process	BP
GO:0009507	chloroplast	CC
GO:0009526	plastid envelope	CC
GO:0009532	plastid stroma	CC
GO:0009536	plastid	CC
GO:0009570	chloroplast stroma	CC
GO:0009579	thylakoid	CC
GO:0009941	chloroplast envelope	CC
GO:0009987	cellular process	BP
GO:0015980	energy derivation by oxidation of organic compounds	BP
GO:0016491	oxidoreductase activity	MF
GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	MF
GO:0016615	malate dehydrogenase activity	MF
GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	MF
GO:0016651	oxidoreductase activity, acting on NAD(P)H	MF
GO:0016652	oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor	MF
GO:0016999	antibiotic metabolic process	BP
GO:0017144	xenobiotic metabolic process	BP
GO:0019362	pyridine nucleotide metabolic process	BP
GO:0019637	organophosphate metabolic process	BP
GO:0019674	NAD metabolic process	BP
GO:0019752	carboxylic acid metabolic process	BP
GO:0030060	L-malate dehydrogenase activity	MF
GO:0031967	organelle envelope	CC
GO:0031975	envelope	CC
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043436	oxoacid metabolic process	BP
GO:0043648	dicarboxylic acid metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044434	obsolete chloroplast part	CC
GO:0044435	obsolete plastid part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0045333	cellular respiration	BP
GO:0046483	heterocycle metabolic process	BP
GO:0046496	nicotinamide nucleotide metabolic process	BP
GO:0048046	apoplast	CC
GO:0050896	response to stimulus	BP
GO:0051186	obsolete cofactor metabolic process	BP
GO:0051775	response to redox state	BP
GO:0055086	nucleobase-containing small molecule metabolic process	BP
GO:0055114	obsolete oxidation-reduction process	BP
GO:0071704	organic substance metabolic process	BP
GO:0072350	tricarboxylic acid metabolic process	BP
GO:0072524	pyridine-containing compound metabolic process	BP
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901564	organonitrogen compound metabolic process	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00710	Carbon fixation in photosynthetic organisms	-
map00620	Pyruvate metabolism	-