PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	geneMaker00009699 View in Genome Browser
Position	GWHBGXC00000002:3095394-3132798 (+) 37404bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
Organism	Cinnamomum camphora
Also AS	AT1G12550

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	geneMaker00023928 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family geneMaker00017791 Glyoxylate succinic semialdehyde reductase 2 geneMaker00016993 Glyoxylate succinic semialdehyde reductase
Regulatory gene	geneMaker00006659 Protein BASIC PENTACYSTEINE2-like geneMaker00018702 Protein BASIC PENTACYSTEINE6-like geneMaker00025724 Protein BASIC PENTACYSTEINE2-like

Load All Networks

Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00630	Glyoxylate and dicarboxylate metabolism	-
map00260	Glycine, serine and threonine metabolism	Serine is derived from 3-phospho-D-glycerate, an intermediate of glycolysis [MD:M00020], and glycine is derived from serine. Threonine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, threonine is derived from aspartate [MD:M00018].