Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
geneMaker00010981
View in Genome Browser
Position
GWHBGXC00000012:38812750-38819384 (+)
6634bp
Gene Type
gene
Gene Description (Protein Product)
Transcription factor
Organism
Cinnamomum camphora
Also AS AT2G20180

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
geneMaker00016437 Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region
geneMaker00016015 Belongs to the GRAS family
geneMaker00016007 Belongs to the GRAS family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0001101 response to acid chemical BP
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0003700 DNA-binding transcription factor activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0006355 regulation of DNA-templated transcription BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006778 porphyrin-containing compound metabolic process BP
GO:0006779 porphyrin-containing compound biosynthetic process BP
GO:0006783 heme biosynthetic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009314 response to radiation BP
GO:0009416 response to light stimulus BP
GO:0009605 response to external stimulus BP
GO:0009606 tropism BP
GO:0009628 response to abiotic stimulus BP
GO:0009629 response to gravity BP
GO:0009630 gravitropism BP
GO:0009639 response to red or far red light BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009739 response to gibberellin BP
GO:0009740 gibberellic acid mediated signaling pathway BP
GO:0009755 hormone-mediated signaling pathway BP
GO:0009889 regulation of biosynthetic process BP
GO:0009959 negative gravitropism BP
GO:0009987 cellular process BP
GO:0010017 red or far-red light signaling pathway BP
GO:0010029 regulation of seed germination BP
GO:0010033 response to organic substance BP
GO:0010099 regulation of photomorphogenesis BP
GO:0010100 negative regulation of photomorphogenesis BP
GO:0010114 response to red light BP
GO:0010161 red light signaling pathway BP
GO:0010187 negative regulation of seed germination BP
GO:0010313 phytochrome binding MF
GO:0010468 regulation of gene expression BP
GO:0010476 gibberellin mediated signaling pathway BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0015994 chlorophyll metabolic process BP
GO:0015995 chlorophyll biosynthetic process BP
GO:0018130 heterocycle biosynthetic process BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0019438 aromatic compound biosynthetic process BP
GO:0023052 signaling BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0032870 cellular response to hormone stimulus BP
GO:0033013 tetrapyrrole metabolic process BP
GO:0033014 tetrapyrrole biosynthetic process BP
GO:0033993 response to lipid BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0042168 heme metabolic process BP
GO:0042221 response to chemical BP
GO:0042440 pigment metabolic process BP
GO:0042802 identical protein binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044237 cellular metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0046148 pigment biosynthetic process BP
GO:0046483 heterocycle metabolic process BP
GO:0048519 negative regulation of biological process BP
GO:0048580 regulation of post-embryonic development BP
GO:0048581 negative regulation of post-embryonic development BP
GO:0048583 regulation of response to stimulus BP
GO:0048585 negative regulation of response to stimulus BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051093 negative regulation of developmental process BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051186 obsolete cofactor metabolic process BP
GO:0051188 obsolete cofactor biosynthetic process BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051241 negative regulation of multicellular organismal process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0051716 cellular response to stimulus BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0065007 biological regulation BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071214 cellular response to abiotic stimulus BP
GO:0071229 cellular response to acid chemical BP
GO:0071310 cellular response to organic substance BP
GO:0071370 cellular response to gibberellin stimulus BP
GO:0071396 cellular response to lipid BP
GO:0071478 cellular response to radiation BP
GO:0071482 cellular response to light stimulus BP
GO:0071489 cellular response to red or far red light BP
GO:0071491 cellular response to red light BP
GO:0071495 cellular response to endogenous stimulus BP
GO:0071704 organic substance metabolic process BP
GO:0080090 regulation of primary metabolic process BP
GO:0097159 organic cyclic compound binding MF
GO:0104004 cellular response to environmental stimulus BP
GO:0140110 transcription regulator activity MF
GO:1900140 regulation of seedling development BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901363 heterocyclic compound binding MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901700 response to oxygen-containing compound BP
GO:1901701 cellular response to oxygen-containing compound BP
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:2000026 regulation of multicellular organismal development BP
GO:2000030 regulation of response to red or far red light BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2001141 regulation of RNA biosynthetic process BP
KEGG Term Name Description
map04075 Plant hormone signal transduction -