Basic Information
Gene ID
geneMaker00011014
Position
GWHBGXC00000007:29084203-29085814 (-)
1611bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the oxygen-dependent FAD-linked oxidoreductase family
Organism
Also AS AT5G44400

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
geneMaker00019807 Cinnamyl alcohol dehydrogenase
geneMaker00024775 Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily
geneMaker00013643 Removal of H(2)O(2); oxidation of toxic reductants; biosynthesis and degradation of lignin; suberization; auxin catabolism; response to environmental stresses such as wounding; pathogen attack and oxidative stress
Regulatory gene
geneMaker00000173 MYB family transcription factor
geneMaker00000573 WRKY Transcription Factor
geneMaker00000995 Transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00940 Phenylpropanoid biosynthesis Phenylpropanoids are a group of plant secondary metabolites derived from phenylalanine and having a wide variety of functions both as structural and signaling molecules. Phenylalanine is first converted to cinnamic acid by deamination. It is followed by hydroxylation and frequent methylation to generate coumaric acid and other acids with a phenylpropane (C6-C3) unit. Reduction of the CoA-activated carboxyl groups of these acids results in the corresponding aldehydes and alcohols. The alcohols are called monolignols, the starting compounds for biosynthesis of lignin.