Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
geneMaker00013053
View in Genome Browser
Position
GWHBGXC00000008:6102397-6111825 (-)
9428bp
Gene Type
gene
Gene Description (Protein Product)
-
Organism
Cinnamomum camphora
Also AS AT5G57880

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
geneMaker00020969 atprd3;prd3
geneMaker00015911 Homologous-pairing protein 2 homolog
geneMaker00024402 5'-3' exoribonuclease
Regulatory gene
geneMaker00007025 dof zinc finger protein
geneMaker00020169 Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
geneMaker00021756 dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000212 meiotic spindle organization BP
GO:0000226 microtubule cytoskeleton organization BP
GO:0000280 nuclear division BP
GO:0003006 developmental process involved in reproduction BP
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006259 DNA metabolic process BP
GO:0006310 DNA recombination BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006996 organelle organization BP
GO:0007010 cytoskeleton organization BP
GO:0007017 microtubule-based process BP
GO:0007049 cell cycle BP
GO:0007051 spindle organization BP
GO:0007059 chromosome segregation BP
GO:0007127 meiosis I BP
GO:0007129 homologous chromosome pairing at meiosis BP
GO:0007131 reciprocal meiotic recombination BP
GO:0007140 male meiotic nuclear division BP
GO:0007275 multicellular organism development BP
GO:0007276 gamete generation BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009553 embryo sac development BP
GO:0009555 pollen development BP
GO:0009987 cellular process BP
GO:0016043 cellular component organization BP
GO:0019953 sexual reproduction BP
GO:0022402 cell cycle process BP
GO:0022412 cellular process involved in reproduction in multicellular organism BP
GO:0022414 reproductive process BP
GO:0022607 cellular component assembly BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032504 multicellular organism reproduction BP
GO:0034293 sexual sporulation BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0035825 homologous recombination BP
GO:0042138 meiotic DNA double-strand break formation BP
GO:0043170 macromolecule metabolic process BP
GO:0043934 sporulation BP
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044703 multi-organism reproductive process BP
GO:0045132 meiotic chromosome segregation BP
GO:0045143 homologous chromosome segregation BP
GO:0046483 heterocycle metabolic process BP
GO:0048229 gametophyte development BP
GO:0048232 male gamete generation BP
GO:0048236 plant-type sporogenesis BP
GO:0048285 organelle fission BP
GO:0048609 multicellular organismal reproductive process BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0051026 chiasma assembly BP
GO:0051276 chromosome organization BP
GO:0051321 meiotic cell cycle BP
GO:0051704 obsolete multi-organism process BP
GO:0061982 meiosis I cell cycle process BP
GO:0070192 chromosome organization involved in meiotic cell cycle BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0090304 nucleic acid metabolic process BP
GO:0090305 nucleic acid phosphodiester bond hydrolysis BP
GO:0098813 nuclear chromosome segregation BP
GO:0140013 meiotic nuclear division BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1903046 meiotic cell cycle process BP