Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
geneMaker00015533
View in Genome Browser
Position
GWHBGXC00000005:11900444-11902996 (+)
2552bp
Gene Type
gene
Gene Description (Protein Product)
Allene oxide cyclase
Organism
Cinnamomum camphora
Also AS AT1G13280

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
geneMaker00028136 polyubiquitin
geneMaker00024859 Converts proline to delta-1-pyrroline-5-carboxylate
geneMaker00023720 Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development; pest resistance; and senescence or responses to wounding
Regulatory gene
geneMaker00000144 homeobox-leucine zipper protein
geneMaker00000546 Zinc finger protein
geneMaker00000601 radialis-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005886 plasma membrane CC
GO:0006082 organic acid metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0009694 jasmonic acid metabolic process BP
GO:0009695 jasmonic acid biosynthetic process BP
GO:0009975 cyclase activity MF
GO:0009987 cellular process BP
GO:0010817 regulation of hormone levels BP
GO:0016020 membrane CC
GO:0016053 organic acid biosynthetic process BP
GO:0016853 isomerase activity MF
GO:0016860 intramolecular oxidoreductase activity MF
GO:0019752 carboxylic acid metabolic process BP
GO:0032787 monocarboxylic acid metabolic process BP
GO:0042445 hormone metabolic process BP
GO:0042446 hormone biosynthetic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043436 oxoacid metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0044283 small molecule biosynthetic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046394 carboxylic acid biosynthetic process BP
GO:0046423 allene-oxide cyclase activity MF
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0071704 organic substance metabolic process BP
GO:0071944 cell periphery CC
GO:0072330 monocarboxylic acid biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00592 alpha-Linolenic acid metabolism -