PPGR - Gene Detail

Basic Information

Gene ID	geneMaker00016753 View in Genome Browser
Position	GWHBGXC00000006:33041333-33046885 (+) 5552bp
Gene Type	gene
Gene Description (Protein Product)	Catalyzes xyloglucan endohydrolysis (XEH) and or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers; an essential constituent of the primary cell wall; and thereby participates in cell wall construction of growing tissues
Organism	Cinnamomum camphora
Also AS	AT2G36870

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

geneMaker00024289 Catalyzes xyloglucan endohydrolysis (XEH) and or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers; an essential constituent of the primary cell wall; and thereby participates in cell wall construction of growing tissues

geneMaker00019237 Catalyzes xyloglucan endohydrolysis (XEH) and or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers; an essential constituent of the primary cell wall; and thereby participates in cell wall construction of growing tissues

geneMaker00027352 Endoglucanase

Regulatory gene

geneMaker00000164 MADS-box transcription factor

geneMaker00001778 Agamous-like MADS-box protein AGL9 homolog

geneMaker00003711 AP2-like ethylene-responsive transcription factor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009056	catabolic process	BP
GO:0009987	cellular process	BP
GO:0016998	cell wall macromolecule catabolic process	BP
GO:0043170	macromolecule metabolic process	BP
GO:0044036	cell wall macromolecule metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044248	cellular catabolic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0071554	cell wall organization or biogenesis	BP
GO:0071704	organic substance metabolic process	BP