PPGR - Gene Detail

Gene ID	geneMaker00019822 View in Genome Browser
Position	GWHBGXC00000007:45356826-45361545 (-) 4719bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
Organism	Cinnamomum camphora
Also AS	AT5G51790

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)	geneMaker00024386 peroxisomal (S)-2-hydroxy-acid oxidase geneMaker00023928 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family geneMaker00023624 peroxisomal (S)-2-hydroxy-acid oxidase
Regulatory gene	geneMaker00006659 Protein BASIC PENTACYSTEINE2-like geneMaker00018702 Protein BASIC PENTACYSTEINE6-like geneMaker00019551 Protein NLP7-like isoform X1

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Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005829	cytosol	CC
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009853	photorespiration	BP
GO:0009987	cellular process	BP
GO:0016491	oxidoreductase activity	MF
GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	MF
GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	MF
GO:0016618	hydroxypyruvate reductase activity	MF
GO:0030267	glyoxylate reductase (NADP+) activity	MF
GO:0043094	cellular metabolic compound salvage	BP
GO:0044237	cellular metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0055114	obsolete oxidation-reduction process	BP

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00630	Glyoxylate and dicarboxylate metabolism	-
map00260	Glycine, serine and threonine metabolism	Serine is derived from 3-phospho-D-glycerate, an intermediate of glycolysis [MD:M00020], and glycine is derived from serine. Threonine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, threonine is derived from aspartate [MD:M00018].