PPGR - Gene Detail

Basic Information

Gene ID	geneMaker00020405 View in Genome Browser
Position	GWHBGXC00000009:2889128-2917536 (-) 28408bp
Gene Type	gene
Gene Description (Protein Product)	Transducin WD40 repeat-like superfamily protein
Organism	Cinnamomum camphora
Also AS	AT4G35560

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

geneMaker00027575 Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor

geneMaker00024515 Belongs to the syntaxin family

geneMaker00024764 Belongs to the adaptor complexes medium subunit family

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000149	SNARE binding	MF
GO:0002791	regulation of peptide secretion	BP
GO:0003674	molecular_function	MF
GO:0005096	GTPase activator activity	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005886	plasma membrane	CC
GO:0008047	enzyme activator activity	MF
GO:0008150	biological_process	BP
GO:0012505	endomembrane system	CC
GO:0016020	membrane	CC
GO:0017016	small GTPase binding	MF
GO:0017075	syntaxin-1 binding	MF
GO:0017137	small GTPase binding	MF
GO:0017157	regulation of exocytosis	BP
GO:0019899	enzyme binding	MF
GO:0019905	syntaxin binding	MF
GO:0030141	secretory granule	CC
GO:0030234	enzyme regulator activity	MF
GO:0030695	GTPase regulator activity	MF
GO:0031267	small GTPase binding	MF
GO:0031410	cytoplasmic vesicle	CC
GO:0031982	vesicle	CC
GO:0032879	regulation of localization	BP
GO:0032880	regulation of protein localization	BP
GO:0043085	positive regulation of catalytic activity	BP
GO:0043087	regulation of GTPase activity	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043547	positive regulation of GTPase activity	BP
GO:0044093	positive regulation of molecular function	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0045921	positive regulation of exocytosis	BP
GO:0048518	positive regulation of biological process	BP
GO:0048522	positive regulation of cellular process	BP
GO:0050708	regulation of protein secretion	BP
GO:0050789	regulation of biological process	BP
GO:0050790	regulation of catalytic activity	BP
GO:0050794	regulation of cellular process	BP
GO:0051020	GTPase binding	MF
GO:0051046	regulation of secretion	BP
GO:0051047	positive regulation of secretion	BP
GO:0051049	regulation of transport	BP
GO:0051050	positive regulation of transport	BP
GO:0051223	regulation of protein transport	BP
GO:0051336	regulation of hydrolase activity	BP
GO:0051345	positive regulation of hydrolase activity	BP
GO:0060589	nucleoside-triphosphatase regulator activity	MF
GO:0060627	regulation of vesicle-mediated transport	BP
GO:0065007	biological regulation	BP
GO:0065009	regulation of molecular function	BP
GO:0070201	regulation of establishment of protein localization	BP
GO:0071944	cell periphery	CC
GO:0090087	regulation of peptide transport	BP
GO:0097708	intracellular vesicle	CC
GO:0098772	molecular function regulator activity	MF
GO:0099503	secretory vesicle	CC
GO:1903530	regulation of secretion by cell	BP
GO:1903532	positive regulation of secretion by cell	BP