PPGR - Gene Detail

Gene ID	geneMaker00024808 View in Genome Browser
Position	GWHBGXC00000007:48712842-48715822 (+) 2980bp
Gene Type	gene
Gene Description (Protein Product)	RAB GTPase homolog
Organism	Cinnamomum camphora
Also AS	AT5G60860

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)	geneMaker00027918 Sugar phosphate phosphate translocator geneMaker00028336 May be involved in both secretory and endocytic intracellular trafficking in the endosomal prevacuolar compartments geneMaker00029575 RING-type E3 ubiquitin transferase
Regulatory gene	geneMaker00000164 MADS-box transcription factor geneMaker00001778 Agamous-like MADS-box protein AGL9 homolog geneMaker00007025 dof zinc finger protein

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Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005768	endosome	CC
GO:0005829	cytosol	CC
GO:0008150	biological_process	BP
GO:0009987	cellular process	BP
GO:0010035	response to inorganic substance	BP
GO:0010038	response to metal ion	BP
GO:0012505	endomembrane system	CC
GO:0031410	cytoplasmic vesicle	CC
GO:0031982	vesicle	CC
GO:0042221	response to chemical	BP
GO:0042546	cell wall biogenesis	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0044085	cellular component biogenesis	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0046686	response to cadmium ion	BP
GO:0050896	response to stimulus	BP
GO:0071554	cell wall organization or biogenesis	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0097708	intracellular vesicle	CC