Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
geneMaker00024947
View in Genome Browser
Position
GWHBGXC00000009:38999667-39004489 (+)
4822bp
Gene Type
gene
Gene Description (Protein Product)
Lysine-specific histone demethylase 1 homolog
Organism
Cinnamomum camphora
Also AS AT3G10390

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
geneMaker00025729 E3 SUMO-protein ligase
geneMaker00025798 Zinc finger protein AZF1-like
geneMaker00026302 ZINC FINGER protein

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0003006 developmental process involved in reproduction BP
GO:0006325 chromatin organization BP
GO:0006464 protein modification process BP
GO:0006476 protein deacetylation BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006996 organelle organization BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009791 post-embryonic development BP
GO:0009987 cellular process BP
GO:0010228 vegetative to reproductive phase transition of meristem BP
GO:0016043 cellular component organization BP
GO:0016569 obsolete covalent chromatin modification BP
GO:0016570 histone modification BP
GO:0016575 histone deacetylation BP
GO:0019538 protein metabolic process BP
GO:0022414 reproductive process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0035601 protein deacylation BP
GO:0036211 protein modification process BP
GO:0043170 macromolecule metabolic process BP
GO:0043412 macromolecule modification BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0051276 chromosome organization BP
GO:0061458 reproductive system development BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0098732 macromolecule deacylation BP
GO:1901564 organonitrogen compound metabolic process BP