PPGR - Gene Detail

Basic Information

Gene ID	geneMaker00026169 View in Genome Browser
Position	GWHBGXC00000011:34507038-34539391 (+) 32353bp
Gene Type	gene
Gene Description (Protein Product)	Essential component of the vacuolar proton pump (V- ATPase); a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase
Organism	Cinnamomum camphora
Also AS	AT2G28520

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

geneMaker00026183 Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells; thus providing most of the energy required for transport processes in the vacuolar system

geneMaker00027745 soluble inorganic pyrophosphatase

geneMaker00028887 ATP synthase subunit delta'

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

KEGG Term	Name	Description
map04145	Phagosome	Phagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is formed when the specific receptors on the phagocyte surface recognize ligands on the particle surface. After formation, nascent phagosomes progressively acquire digestive characteristics. This maturation of phagosomes involves regulated interaction with the other membrane organelles, including recycling endosomes, late endosomes and lysosomes. The fusion of phagosomes and lysosomes releases toxic products that kill most bacteria and degrade them into fragments. However, some bacteria have strategies to escape the bactericidal mechanisms associated with phagocytosis and survive within host phagocytes.
map01100	Metabolic pathways	-
map00190	Oxidative phosphorylation	-