PPGR - Gene Detail

Basic Information

Gene ID	geneMaker00026234 View in Genome Browser
Position	GWHBGXC00000011:35472059-35475359 (+) 3300bp
Gene Type	gene
Gene Description (Protein Product)	Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls
Organism	Cinnamomum camphora
Also AS	AT2G37090

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

geneMaker00027595 Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily

geneMaker00029373 SANT SWI3; ADA2; N-CoR and TFIIIB'' DNA-binding domains

geneMaker00026985 Auxin transporter-like protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000139	Golgi membrane	CC
GO:0000271	polysaccharide biosynthetic process	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005794	Golgi apparatus	CC
GO:0005975	carbohydrate metabolic process	BP
GO:0005976	polysaccharide metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009058	biosynthetic process	BP
GO:0009059	macromolecule biosynthetic process	BP
GO:0009832	plant-type cell wall biogenesis	BP
GO:0009834	plant-type secondary cell wall biogenesis	BP
GO:0009987	cellular process	BP
GO:0010383	cell wall polysaccharide metabolic process	BP
GO:0010410	hemicellulose metabolic process	BP
GO:0010413	glucuronoxylan metabolic process	BP
GO:0010417	glucuronoxylan biosynthetic process	BP
GO:0012505	endomembrane system	CC
GO:0016020	membrane	CC
GO:0016051	carbohydrate biosynthetic process	BP
GO:0016740	transferase activity	MF
GO:0016757	glycosyltransferase activity	MF
GO:0016763	pentosyltransferase activity	MF
GO:0031090	organelle membrane	CC
GO:0031984	organelle subcompartment	CC
GO:0033692	cellular polysaccharide biosynthetic process	BP
GO:0034637	cellular carbohydrate biosynthetic process	BP
GO:0034645	cellular macromolecule biosynthetic process	BP
GO:0042285	xylosyltransferase activity	MF
GO:0042546	cell wall biogenesis	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044036	cell wall macromolecule metabolic process	BP
GO:0044038	cell wall macromolecule biosynthetic process	BP
GO:0044085	cellular component biogenesis	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044262	cellular carbohydrate metabolic process	BP
GO:0044264	cellular polysaccharide metabolic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044431	obsolete Golgi apparatus part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0045491	xylan metabolic process	BP
GO:0045492	xylan biosynthetic process	BP
GO:0070589	cellular component macromolecule biosynthetic process	BP
GO:0070592	cell wall polysaccharide biosynthetic process	BP
GO:0071554	cell wall organization or biogenesis	BP
GO:0071669	plant-type cell wall organization or biogenesis	BP
GO:0071704	organic substance metabolic process	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0098588	bounding membrane of organelle	CC
GO:0098791	Golgi apparatus subcompartment	CC
GO:1901576	organic substance biosynthetic process	BP