PPGR - Gene Detail

Basic Information

Gene ID	geneMaker00026386 View in Genome Browser
Position	GWHBGXC00000003:6510175-6562085 (-) 51910bp
Gene Type	gene
Gene Description (Protein Product)	PsaA and PsaB bind P700; the primary electron donor of photosystem I (PSI); as well as the electron acceptors A0; A1 and FX. PSI is a plastocyanin-ferredoxin oxidoreductase; converting photonic excitation into a charge separation; which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0; A1; FX; FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin
Organism	Cinnamomum camphora
Also AS	ATCG00350

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

geneMaker00026513 Photosystem I reaction center subunit V

geneMaker00026919 The light-harvesting complex (LHC) functions as a light receptor; it captures and delivers excitation energy to photosystems with which it is closely associated

geneMaker00026917 The light-harvesting complex (LHC) functions as a light receptor; it captures and delivers excitation energy to photosystems with which it is closely associated

Regulatory gene

geneMaker00000453 NAC domain-containing protein 21

geneMaker00000590 Transcription factor JUNGBRUNNEN 1-like

geneMaker00002370 NAC domain-containing protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00195	Photosynthesis	Photosynthesis in green plants and specialized bacteria is the process of utilizing light energy to synthesize organic compounds from carbon dioxide and water. It consists of the light dependent part (light reaction) and the light independent part (dark reaction, carbon fixation). The light reaction takes place in thylakoid, a membrane-bound compartment inside chloroplasts and cyanobacteria. The light energy is used by photosystems I and II to generate proton motive force and reducing power (NADPH or NADH). The proton motive force is used by ATP synthase to generate ATP, essentially in the same way as the mitochondrial respiratory chain. The supplies of ATP and NAD(P)H are then used to fix carbon dioxide.