Basic Information
Gene ID
geneMaker00027105
Position
GWHBGXC00000002:83811313-83823148 (-)
11835bp
Gene Type
gene
Gene Description (Protein Product)
Survival of motor neuron-related-splicing factor
Organism
Also AS AT2G02570

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
geneMaker00029698 U2 small nuclear ribonucleoprotein
geneMaker00027130 RNA recognition motif
geneMaker00027956 Bifunctional phosphatase IMPL2
Regulatory gene
geneMaker00000546 Zinc finger protein
geneMaker00000601 radialis-like
geneMaker00002750 Transcription factor

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.