Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
geneMaker00027654
View in Genome Browser
Position
GWHBGXC00000003:83899964-83920704 (+)
20740bp
Gene Type
gene
Gene Description (Protein Product)
Defective in exine formation
Organism
Cinnamomum camphora
Also AS AT3G09090

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
geneMaker00029615 Belongs to the CAP family
geneMaker00029618 Belongs to the CAP family
geneMaker00028197 Belongs to the universal ribosomal protein uS3 family
Regulatory gene
geneMaker00007025 dof zinc finger protein
geneMaker00021756 dof zinc finger protein
geneMaker00027806 Transcriptional activator that specifically binds 5'- GATA-3' or 5'-GAT-3' motifs within gene promoters

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005509 calcium ion binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0009555 pollen development BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009987 cellular process BP
GO:0010208 pollen wall assembly BP
GO:0010584 pollen exine formation BP
GO:0010927 cellular component assembly involved in morphogenesis BP
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0022607 cellular component assembly BP
GO:0030198 extracellular matrix organization BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032989 cellular component morphogenesis BP
GO:0043062 extracellular structure organization BP
GO:0043167 ion binding MF
GO:0043169 cation binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044085 cellular component biogenesis BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0045229 external encapsulating structure organization BP
GO:0046872 metal ion binding MF
GO:0048229 gametophyte development BP
GO:0048646 anatomical structure formation involved in morphogenesis BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0085029 extracellular matrix assembly BP