Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
geneMaker00027971
View in Genome Browser
Position
GWHBGXC00000001:81772846-81774678 (-)
1832bp
Gene Type
gene
Gene Description (Protein Product)
DNA-directed RNA polymerases II; IV and V subunit
Organism
Cinnamomum camphora
Also AS AT2G15430

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
geneMaker00028676 May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter; which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex
geneMaker00029526 RNA polymerase II transcription factor B subunit
geneMaker00029432 RNA polymerase II C-terminal domain phosphatase-like
Regulatory gene
geneMaker00006659 Protein BASIC PENTACYSTEINE2-like
geneMaker00018702 Protein BASIC PENTACYSTEINE6-like
geneMaker00025724 Protein BASIC PENTACYSTEINE2-like

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000418 RNA polymerase IV complex CC
GO:0000419 RNA polymerase V complex CC
GO:0000428 DNA-directed RNA polymerase complex CC
GO:0003002 regionalization BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005654 nucleoplasm CC
GO:0005665 RNA polymerase II, core complex CC
GO:0005730 nucleolus CC
GO:0005737 cytoplasm CC
GO:0007275 multicellular organism development BP
GO:0007389 pattern specification process BP
GO:0008150 biological_process BP
GO:0009791 post-embryonic development BP
GO:0009888 tissue development BP
GO:0010374 stomatal complex development BP
GO:0010375 stomatal complex patterning BP
GO:0016591 RNA polymerase II, holoenzyme CC
GO:0030880 RNA polymerase complex CC
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032991 protein-containing complex CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044428 obsolete nuclear part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044451 obsolete nucleoplasm part CC
GO:0044464 obsolete cell part CC
GO:0048856 anatomical structure development BP
GO:0055029 nuclear DNA-directed RNA polymerase complex CC
GO:0061695 transferase complex, transferring phosphorus-containing groups CC
GO:0070013 intracellular organelle lumen CC
GO:0090558 plant epidermis development BP
GO:1902494 catalytic complex CC
GO:1990234 transferase complex CC
KEGG Term Name Description
map03020 RNA polymerase -