Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
geneMaker00028090
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Position
GWHBGXC00000002:8334625-8348760 (+)
14135bp
Gene Type
gene
Gene Description (Protein Product)
Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex); which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
Organism
Cinnamomum camphora
Also AS AT5G13430

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
geneMaker00029755 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
geneMaker00028583 Cytochrome c oxidase subunit 6a
geneMaker00028887 ATP synthase subunit delta'
Regulatory gene
geneMaker00000601 radialis-like
geneMaker00002750 Transcription factor
geneMaker00003895 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0005740 mitochondrial envelope CC
GO:0005743 mitochondrial inner membrane CC
GO:0005746 mitochondrial respirasome CC
GO:0005750 mitochondrial respiratory chain complex III CC
GO:0006091 generation of precursor metabolites and energy BP
GO:0006950 response to stress BP
GO:0008121 ubiquinol-cytochrome-c reductase activity MF
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009055 electron transfer activity MF
GO:0009060 aerobic respiration BP
GO:0009266 response to temperature stimulus BP
GO:0009408 response to heat BP
GO:0009628 response to abiotic stimulus BP
GO:0009987 cellular process BP
GO:0015980 energy derivation by oxidation of organic compounds BP
GO:0016020 membrane CC
GO:0016491 oxidoreductase activity MF
GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors MF
GO:0016681 obsolete oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor MF
GO:0019866 organelle inner membrane CC
GO:0022900 electron transport chain BP
GO:0031090 organelle membrane CC
GO:0031966 mitochondrial membrane CC
GO:0031967 organelle envelope CC
GO:0031975 envelope CC
GO:0032991 protein-containing complex CC
GO:0043167 ion binding MF
GO:0043169 cation binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044237 cellular metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044429 obsolete mitochondrial part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044455 obsolete mitochondrial membrane part CC
GO:0044464 obsolete cell part CC
GO:0045275 respiratory chain complex III CC
GO:0045333 cellular respiration BP
GO:0046872 metal ion binding MF
GO:0050896 response to stimulus BP
GO:0055114 obsolete oxidation-reduction process BP
GO:0070069 cytochrome complex CC
GO:0070469 respirasome CC
GO:0098796 membrane protein complex CC
GO:0098798 mitochondrial protein-containing complex CC
GO:0098800 inner mitochondrial membrane protein complex CC
GO:0098803 respiratory chain complex CC
GO:1902494 catalytic complex CC
GO:1990204 oxidoreductase complex CC
KEGG Term Name Description
map01100 Metabolic pathways -
map00190 Oxidative phosphorylation -