Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
geneMaker00028323
View in Genome Browser
Position
GWHBGXC00000003:64046250-64085681 (+)
39431bp
Gene Type
gene
Gene Description (Protein Product)
DnaJ homolog; subfamily C; member
Organism
Cinnamomum camphora
Also AS AT5G12430

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
geneMaker00028685 transducin family protein WD-40 repeat family
geneMaker00028387 DNA-binding protein
geneMaker00028337 Component of the FACT complex; a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation; DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome; then subsequently promotes the reestablishment of the nucleosome following the passage of RNA polymerase II
Regulatory gene
geneMaker00000453 NAC domain-containing protein 21
geneMaker00000590 Transcription factor JUNGBRUNNEN 1-like
geneMaker00002370 NAC domain-containing protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005654 nucleoplasm CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006457 protein folding BP
GO:0006458 'de novo' protein folding BP
GO:0008150 biological_process BP
GO:0009987 cellular process BP
GO:0031072 heat shock protein binding MF
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044428 obsolete nuclear part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0051084 'de novo' post-translational protein folding BP
GO:0051085 chaperone cofactor-dependent protein refolding BP
GO:0061077 chaperone-mediated protein folding BP
GO:0070013 intracellular organelle lumen CC