Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
geneMaker00028348
View in Genome Browser
Position
GWHBGXC00000004:18403581-18431293 (+)
27712bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the terpene cyclase mutase family
Organism
Cinnamomum camphora
Also AS AT2G07050

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
geneMaker00029277 CAAX prenyl protease 1 homolog
geneMaker00028799 This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA; which is the substrate for HMG-CoA reductase
geneMaker00028450 Squalene synthase-like
Regulatory gene
geneMaker00000164 MADS-box transcription factor
geneMaker00000546 Zinc finger protein
geneMaker00001778 Agamous-like MADS-box protein AGL9 homolog

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005773 vacuole CC
GO:0006629 lipid metabolic process BP
GO:0006720 isoprenoid metabolic process BP
GO:0006721 terpenoid metabolic process BP
GO:0006722 triterpenoid metabolic process BP
GO:0006996 organelle organization BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008299 isoprenoid biosynthetic process BP
GO:0008610 lipid biosynthetic process BP
GO:0009058 biosynthetic process BP
GO:0009555 pollen development BP
GO:0009657 plastid organization BP
GO:0009668 plastid membrane organization BP
GO:0009987 cellular process BP
GO:0010027 thylakoid membrane organization BP
GO:0010685 tetracyclic triterpenoid metabolic process BP
GO:0010686 tetracyclic triterpenoid biosynthetic process BP
GO:0016043 cellular component organization BP
GO:0016104 triterpenoid biosynthetic process BP
GO:0016114 terpenoid biosynthetic process BP
GO:0016853 isomerase activity MF
GO:0016866 intramolecular transferase activity MF
GO:0016871 cycloartenol synthase activity MF
GO:0019742 pentacyclic triterpenoid metabolic process BP
GO:0019745 pentacyclic triterpenoid biosynthetic process BP
GO:0031559 oxidosqualene cyclase activity MF
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044255 cellular lipid metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0048229 gametophyte development BP
GO:0048856 anatomical structure development BP
GO:0061024 membrane organization BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00909 Sesquiterpenoid biosynthesis Sesquiterpenoids (C15 terpenoids) are a group of terpenoids consisting of three isoprene units. They are derive from farnesyl diphosphate (FPP) and can be cyclized to produce various skeletal structures. Sesquiterpenoid biosynthesis begins with the loss of diphosphate from FPP under the action of sesquiterpene synthesis enzymes, generating an allylic cation that is highly susceptible to intramolecular attacks. Cyclization of the farnesyl cation may take place onto either of the remaining double bonds with the result that 6-, 10-, or 11-membered rings may be formed. Many sesquiterpenoids have been isolated from plants, fungi, marine organisms, and Streptomyces species. This map shows a few examples of acyclic and cyclic sesquiterpenoids.
map00100 Steroid biosynthesis -