Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
geneMaker00028414
View in Genome Browser
Position
GWHBGXC00000004:18106546-18121220 (+)
14674bp
Gene Type
gene
Gene Description (Protein Product)
isoform X1
Organism
Cinnamomum camphora
Also AS AT3G61690

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
geneMaker00029177 attrn1;trn1
geneMaker00029291 Poly(A) RNA polymerase
geneMaker00029523 Histidyl-tRNA synthetase
Regulatory gene
geneMaker00000601 radialis-like
geneMaker00002750 Transcription factor
geneMaker00003895 transcription factor

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004652 polynucleotide adenylyltransferase activity MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005730 nucleolus CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006396 RNA processing BP
GO:0006399 tRNA metabolic process BP
GO:0006401 RNA catabolic process BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009057 macromolecule catabolic process BP
GO:0009987 cellular process BP
GO:0010467 gene expression BP
GO:0016070 RNA metabolic process BP
GO:0016072 rRNA metabolic process BP
GO:0016074 sno(s)RNA metabolic process BP
GO:0016075 rRNA catabolic process BP
GO:0016077 sno(s)RNA catabolic process BP
GO:0016078 tRNA catabolic process BP
GO:0016740 transferase activity MF
GO:0016772 transferase activity, transferring phosphorus-containing groups MF
GO:0016779 nucleotidyltransferase activity MF
GO:0019439 aromatic compound catabolic process BP
GO:0031123 RNA 3'-end processing BP
GO:0031499 TRAMP complex CC
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032991 protein-containing complex CC
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034655 nucleobase-containing compound catabolic process BP
GO:0034660 ncRNA metabolic process BP
GO:0034661 ncRNA catabolic process BP
GO:0043021 ribonucleoprotein complex binding MF
GO:0043023 ribosomal large subunit binding MF
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043629 ncRNA polyadenylation BP
GO:0043630 ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process BP
GO:0043631 RNA polyadenylation BP
GO:0043632 modification-dependent macromolecule catabolic process BP
GO:0043633 polyadenylation-dependent RNA catabolic process BP
GO:0043634 polyadenylation-dependent ncRNA catabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044265 cellular macromolecule catabolic process BP
GO:0044270 cellular nitrogen compound catabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044428 obsolete nuclear part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0044877 protein-containing complex binding MF
GO:0046483 heterocycle metabolic process BP
GO:0046700 heterocycle catabolic process BP
GO:0070013 intracellular organelle lumen CC
GO:0070566 adenylyltransferase activity MF
GO:0071025 RNA surveillance BP
GO:0071027 nuclear RNA surveillance BP
GO:0071029 nuclear ncRNA surveillance BP
GO:0071035 nuclear polyadenylation-dependent rRNA catabolic process BP
GO:0071046 nuclear polyadenylation-dependent ncRNA catabolic process BP
GO:0071704 organic substance metabolic process BP
GO:0090304 nucleic acid metabolic process BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901361 organic cyclic compound catabolic process BP
GO:1901575 organic substance catabolic process BP
GO:1990817 RNA adenylyltransferase activity MF