Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
geneMaker00028460
View in Genome Browser
Position
GWHBGXC00000004:17405595-17417773 (-)
12178bp
Gene Type
gene
Gene Description (Protein Product)
Xylose isomerase
Organism
Cinnamomum camphora
Also AS AT5G57655

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
geneMaker00028545 Belongs to the hexokinase family
geneMaker00029087 Ribose-5-phosphate isomerase
geneMaker00029754 Acyl-CoA dehydrogenase; N-terminal domain
Regulatory gene
geneMaker00006659 Protein BASIC PENTACYSTEINE2-like
geneMaker00018702 Protein BASIC PENTACYSTEINE6-like
geneMaker00025724 Protein BASIC PENTACYSTEINE2-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005773 vacuole CC
GO:0005774 vacuolar membrane CC
GO:0005783 endoplasmic reticulum CC
GO:0005794 Golgi apparatus CC
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0031090 organelle membrane CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044437 obsolete vacuolar part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0098588 bounding membrane of organelle CC
GO:0098805 membrane CC
KEGG Term Name Description
map01100 Metabolic pathways -
map00051 Fructose and mannose metabolism -
map00040 Pentose and glucuronate interconversions -