Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
geneMaker00028787
View in Genome Browser
Position
GWHBGXC00000002:13113605-13118996 (-)
5391bp
Gene Type
gene
Gene Description (Protein Product)
mediator of RNA polymerase II transcription subunit
Organism
Cinnamomum camphora
Also AS AT1G26665

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
geneMaker00029658 mediator of RNA polymerase II transcription subunit
geneMaker00029562 Structural maintenance of chromosomes protein
geneMaker00029311 Pet100
Regulatory gene
geneMaker00006659 Protein BASIC PENTACYSTEINE2-like
geneMaker00018702 Protein BASIC PENTACYSTEINE6-like
geneMaker00025724 Protein BASIC PENTACYSTEINE2-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000428 DNA-directed RNA polymerase complex CC
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005654 nucleoplasm CC
GO:0005667 transcription regulator complex CC
GO:0016591 RNA polymerase II, holoenzyme CC
GO:0016592 mediator complex CC
GO:0030880 RNA polymerase complex CC
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032991 protein-containing complex CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044428 obsolete nuclear part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044451 obsolete nucleoplasm part CC
GO:0044464 obsolete cell part CC
GO:0044798 transcription regulator complex CC
GO:0055029 nuclear DNA-directed RNA polymerase complex CC
GO:0061695 transferase complex, transferring phosphorus-containing groups CC
GO:0070013 intracellular organelle lumen CC
GO:0070847 core mediator complex CC
GO:0090575 RNA polymerase II transcription regulator complex CC
GO:1902494 catalytic complex CC
GO:1990234 transferase complex CC