Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
geneMaker00028809
View in Genome Browser
Position
GWHBGXC00000002:16306845-16338124 (-)
31279bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the acyl-CoA oxidase family
Organism
Cinnamomum camphora
Also AS AT2G35690

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
geneMaker00029754 Acyl-CoA dehydrogenase; N-terminal domain
geneMaker00029758 Acyl-coenzyme A oxidase 4
geneMaker00029716 Acetyl-coenzyme A synthetase
Regulatory gene
geneMaker00000164 MADS-box transcription factor
geneMaker00001778 Agamous-like MADS-box protein AGL9 homolog
geneMaker00007025 dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000166 nucleotide binding MF
GO:0001676 long-chain fatty acid metabolic process BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0003995 acyl-CoA dehydrogenase activity MF
GO:0003997 acyl-CoA oxidase activity MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005777 peroxisome CC
GO:0005911 cell-cell junction CC
GO:0006082 organic acid metabolic process BP
GO:0006629 lipid metabolic process BP
GO:0006631 fatty acid metabolic process BP
GO:0006635 fatty acid beta-oxidation BP
GO:0006950 response to stress BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009058 biosynthetic process BP
GO:0009062 fatty acid catabolic process BP
GO:0009506 plasmodesma CC
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009611 response to wounding BP
GO:0009620 response to fungus BP
GO:0009694 jasmonic acid metabolic process BP
GO:0009695 jasmonic acid biosynthetic process BP
GO:0009987 cellular process BP
GO:0010035 response to inorganic substance BP
GO:0010038 response to metal ion BP
GO:0010817 regulation of hormone levels BP
GO:0016042 lipid catabolic process BP
GO:0016053 organic acid biosynthetic process BP
GO:0016054 organic acid catabolic process BP
GO:0016491 oxidoreductase activity MF
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors MF
GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor MF
GO:0019395 fatty acid oxidation BP
GO:0019752 carboxylic acid metabolic process BP
GO:0030054 cell junction CC
GO:0030258 lipid modification BP
GO:0032787 monocarboxylic acid metabolic process BP
GO:0033539 fatty acid beta-oxidation using acyl-CoA dehydrogenase BP
GO:0034440 lipid oxidation BP
GO:0036094 small molecule binding MF
GO:0042221 response to chemical BP
GO:0042445 hormone metabolic process BP
GO:0042446 hormone biosynthetic process BP
GO:0042579 microbody CC
GO:0043167 ion binding MF
GO:0043168 anion binding MF
GO:0043207 response to external biotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043436 oxoacid metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044242 cellular lipid catabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044255 cellular lipid metabolic process BP
GO:0044281 small molecule metabolic process BP
GO:0044282 small molecule catabolic process BP
GO:0044283 small molecule biosynthetic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046394 carboxylic acid biosynthetic process BP
GO:0046395 carboxylic acid catabolic process BP
GO:0046686 response to cadmium ion BP
GO:0048037 obsolete cofactor binding MF
GO:0050660 flavin adenine dinucleotide binding MF
GO:0050662 obsolete coenzyme binding MF
GO:0050896 response to stimulus BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0055044 symplast CC
GO:0055114 obsolete oxidation-reduction process BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0071704 organic substance metabolic process BP
GO:0072329 monocarboxylic acid catabolic process BP
GO:0072330 monocarboxylic acid biosynthetic process BP
GO:0097159 organic cyclic compound binding MF
GO:1901265 nucleoside phosphate binding MF
GO:1901363 heterocyclic compound binding MF
GO:1901575 organic substance catabolic process BP
GO:1901576 organic substance biosynthetic process BP
KEGG Term Name Description
map04146 Peroxisome Peroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ether lipids and free radical detoxification. The biogenesis of peroxisomes starts with the early peroxins PEX3, PEX16 and PEX19 and proceeds via several steps. The import of membrane proteins into peroxisomes needs PEX19 for recognition, targeting and insertion via docking at PEX3. Matrix proteins in the cytosol are recognized by peroxisomal targeting signals (PTS) and transported to the docking complex at the peroxisomal membrane. Peroxisomes' deficiencies lead to severe and often fatal inherited peroxisomal disorders (PD). PDs are usually classified in two groups. The first group is disorders of peroxisome biogenesis which include Zellweger syndrome, and the second group is single peroxisomal enzyme deficiencies.
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map01040 Biosynthesis of unsaturated fatty acids -
map00640 Propanoate metabolism -
map00592 alpha-Linolenic acid metabolism -
map00410 beta-Alanine metabolism -
map00071 Fatty acid metabolism -