Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
geneMaker00029780
View in Genome Browser
Position
GWHBGXC00000006:53429978-53442940 (+)
12962bp
Gene Type
gene
Gene Description (Protein Product)
isoform X1
Organism
Cinnamomum camphora
Also AS AT5G47430

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Regulatory gene
geneMaker00000164 MADS-box transcription factor
geneMaker00000546 Zinc finger protein
geneMaker00001778 Agamous-like MADS-box protein AGL9 homolog

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000209 protein polyubiquitination BP
GO:0000302 response to reactive oxygen species BP
GO:0001101 response to acid chemical BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004842 ubiquitin-protein transferase activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005654 nucleoplasm CC
GO:0005694 chromosome CC
GO:0005730 nucleolus CC
GO:0005737 cytoplasm CC
GO:0005815 microtubule organizing center CC
GO:0005829 cytosol CC
GO:0005856 cytoskeleton CC
GO:0006275 regulation of DNA replication BP
GO:0006325 chromatin organization BP
GO:0006464 protein modification process BP
GO:0006479 protein methylation BP
GO:0006508 proteolysis BP
GO:0006511 ubiquitin-dependent protein catabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0006970 response to osmotic stress BP
GO:0006974 cellular response to DNA damage stimulus BP
GO:0006979 response to oxidative stress BP
GO:0006996 organelle organization BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008213 protein alkylation BP
GO:0009056 catabolic process BP
GO:0009057 macromolecule catabolic process BP
GO:0009414 response to water deprivation BP
GO:0009415 response to water BP
GO:0009628 response to abiotic stimulus BP
GO:0009635 response to herbicide BP
GO:0009636 response to toxic substance BP
GO:0009651 response to salt stress BP
GO:0009743 response to carbohydrate BP
GO:0009889 regulation of biosynthetic process BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0010035 response to inorganic substance BP
GO:0010038 response to metal ion BP
GO:0010555 response to mannitol BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0015630 microtubule cytoskeleton CC
GO:0016043 cellular component organization BP
GO:0016567 protein ubiquitination BP
GO:0016569 obsolete covalent chromatin modification BP
GO:0016570 histone modification BP
GO:0016571 histone methylation BP
GO:0016604 nuclear body CC
GO:0016607 nuclear speck CC
GO:0016740 transferase activity MF
GO:0018193 peptidyl-amino acid modification BP
GO:0018195 peptidyl-arginine modification BP
GO:0018216 peptidyl-arginine methylation BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0019538 protein metabolic process BP
GO:0019787 ubiquitin-like protein transferase activity MF
GO:0019899 enzyme binding MF
GO:0019900 kinase binding MF
GO:0019901 protein kinase binding MF
GO:0019941 modification-dependent protein catabolic process BP
GO:0030163 protein catabolic process BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032259 methylation BP
GO:0032446 protein modification by small protein conjugation BP
GO:0032991 protein-containing complex CC
GO:0033554 cellular response to stress BP
GO:0034969 histone arginine methylation BP
GO:0034971 histone H3-R17 methylation BP
GO:0036211 protein modification process BP
GO:0042221 response to chemical BP
GO:0042493 response to xenobiotic stimulus BP
GO:0042542 response to hydrogen peroxide BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043412 macromolecule modification BP
GO:0043414 macromolecule methylation BP
GO:0043632 modification-dependent macromolecule catabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044257 protein catabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044265 cellular macromolecule catabolic process BP
GO:0044267 protein metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044428 obsolete nuclear part CC
GO:0044430 obsolete cytoskeletal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044451 obsolete nucleoplasm part CC
GO:0044464 obsolete cell part CC
GO:0046677 response to antibiotic BP
GO:0046686 response to cadmium ion BP
GO:0048518 positive regulation of biological process BP
GO:0048519 negative regulation of biological process BP
GO:0048583 regulation of response to stimulus BP
GO:0048584 positive regulation of response to stimulus BP
GO:0048585 negative regulation of response to stimulus BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051052 regulation of DNA metabolic process BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051276 chromosome organization BP
GO:0051603 proteolysis involved in protein catabolic process BP
GO:0051716 cellular response to stimulus BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0061630 ubiquitin protein ligase activity MF
GO:0061659 ubiquitin-like protein ligase activity MF
GO:0065007 biological regulation BP
GO:0070013 intracellular organelle lumen CC
GO:0070647 protein modification by small protein conjugation or removal BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071310 cellular response to organic substance BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0072756 cellular response to paraquat BP
GO:0080090 regulation of primary metabolic process BP
GO:0080134 regulation of response to stress BP
GO:0097237 cellular response to toxic substance BP
GO:0140096 catalytic activity, acting on a protein MF
GO:1901562 response to paraquat BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901565 organonitrogen compound catabolic process BP
GO:1901575 organic substance catabolic process BP
GO:1901700 response to oxygen-containing compound BP
GO:1902882 regulation of response to oxidative stress BP
GO:1902883 negative regulation of response to oxidative stress BP
GO:1902884 positive regulation of response to oxidative stress BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP