Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
CKAN_00059000.v3
View in Genome Browser
Position
CKAN.scaff0001:9819909-9820676 (-)
767bp
Gene Type
gene
Gene Description (Protein Product)
glycine-rich RNA-binding
Organism
Cinnamomum kanehirae
Also AS AT2G21660

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
CKAN_00868800.v3 attrn1;trn1
CKAN_02525200.v3 Guanine nucleotide-binding protein alpha-1
CKAN_00432100.v3 AtMC9;MC9
Regulatory gene
CKAN_00281900.v3 transcription factor
CKAN_00318100.v3 Transcription factor
CKAN_00340200.v3 SANT SWI3; ADA2; N-CoR and TFIIIB'' DNA-binding domains

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.