Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
CKAN_00091200.v3
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Position
CKAN.scaff0001:15130311-15132545 (+)
2234bp
Gene Type
gene
Gene Description (Protein Product)
Zinc finger CCCH domain-containing protein
Organism
Cinnamomum kanehirae
Also AS AT2G41900

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
CKAN_02326200.v3 deaminase
CKAN_01744600.v3 serine threonine-protein kinase
CKAN_02250700.v3 Zinc finger CCCH domain-containing protein
Regulatory gene
CKAN_00053400.v3 Protein SENSITIVE TO PROTON RHIZOTOXICITY
CKAN_00082000.v3 ZINC FINGER protein
CKAN_00090300.v3 Zinc finger AN1 and C2H2 domain-containing stress-associated protein
Target gene
CKAN_00005300.v3 Belongs to the pirin family
CKAN_00011600.v3
CKAN_00023700.v3 Belongs to the disease resistance NB-LRR family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003700 DNA-binding transcription factor activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006355 regulation of DNA-templated transcription BP
GO:0008150 biological_process BP
GO:0009889 regulation of biosynthetic process BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0065007 biological regulation BP
GO:0080090 regulation of primary metabolic process BP
GO:0140110 transcription regulator activity MF
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2001141 regulation of RNA biosynthetic process BP