Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Basic Information
Gene ID
CKAN_00171000.v3
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Position
CKAN.scaff0001:50627279-50635165 (-)
7886bp
Gene Type
gene
Gene Description (Protein Product)
Homeobox-leucine zipper protein GLABRA
Organism
Cinnamomum kanehirae
Also AS AT1G79840

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
CKAN_01859900.v3 transparent testa glabra
CKAN_00795100.v3 CHD3-type chromatin-remodeling factor
CKAN_00339000.v3 Transcription factor
Regulatory gene
CKAN_01480100.v3 Protein BASIC PENTACYSTEINE6-like
Target gene
CKAN_00003100.v3 GCN5-like protein 1 (GCN5L1)
CKAN_00011600.v3
CKAN_00015100.v3 Bifunctional DNA N-glycosylase with associated apurinic apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER); the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N- glycosidic bond; leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail