PPGR - Gene Detail

Gene ID	CKAN_00486700.v3 View in Genome Browser
Position	CKAN.scaff0002:43439893-43454439 (-) 14546bp
Gene Type	gene
Gene Description (Protein Product)	NHL repeat-containing protein
Organism	Cinnamomum kanehirae
Also AS	AT1G56500

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)	CKAN_02106100.v3 Belongs to the DEAD box helicase family CKAN_01672600.v3 Nuclear pore complex protein NUP160 homolog CKAN_01579200.v3 DEAD DEAH box RNA helicase family protein
Regulatory gene	CKAN_00109600.v3 MADS-box protein CKAN_00283400.v3 MADS-box protein CKAN_00958800.v3 MADS-box protein

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Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0008150	biological_process	BP
GO:0009314	response to radiation	BP
GO:0009416	response to light stimulus	BP
GO:0009507	chloroplast	CC
GO:0009532	plastid stroma	CC
GO:0009534	chloroplast thylakoid	CC
GO:0009536	plastid	CC
GO:0009570	chloroplast stroma	CC
GO:0009579	thylakoid	CC
GO:0009628	response to abiotic stimulus	BP
GO:0010196	nonphotochemical quenching	BP
GO:0016020	membrane	CC
GO:0031976	plastid thylakoid	CC
GO:0031984	organelle subcompartment	CC
GO:0034357	photosynthetic membrane	CC
GO:0042651	thylakoid membrane	CC
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044434	obsolete chloroplast part	CC
GO:0044435	obsolete plastid part	CC
GO:0044436	obsolete thylakoid part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0050896	response to stimulus	BP
GO:1990066	energy quenching	BP