Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
CKAN_00559200.v3
View in Genome Browser
Position
CKAN.scaff0002:58873221-58878566 (-)
5345bp
Gene Type
gene
Gene Description (Protein Product)
response to light intensity
Organism
Cinnamomum kanehirae
Also AS AT1G10522

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
CKAN_02365100.v3 Chloroplast stem-loop binding protein of 41 kDa b
CKAN_02302300.v3 Chloroplast stem-loop binding protein of 41 kDa
CKAN_01052200.v3 hmr;ptac12
Regulatory gene
CKAN_00022600.v3 RNA-metabolising metallo-beta-lactamase family protein
CKAN_00053400.v3 Protein SENSITIVE TO PROTON RHIZOTOXICITY
CKAN_00082000.v3 ZINC FINGER protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0000427 plastid-encoded plastid RNA polymerase complex CC
GO:0000428 DNA-directed RNA polymerase complex CC
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0008150 biological_process BP
GO:0009295 nucleoid CC
GO:0009314 response to radiation BP
GO:0009416 response to light stimulus BP
GO:0009507 chloroplast CC
GO:0009532 plastid stroma CC
GO:0009536 plastid CC
GO:0009570 chloroplast stroma CC
GO:0009628 response to abiotic stimulus BP
GO:0009642 response to light intensity BP
GO:0010468 regulation of gene expression BP
GO:0019222 regulation of metabolic process BP
GO:0030880 RNA polymerase complex CC
GO:0032991 protein-containing complex CC
GO:0042644 chloroplast nucleoid CC
GO:0042646 plastid nucleoid CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0050789 regulation of biological process BP
GO:0050896 response to stimulus BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0061695 transferase complex, transferring phosphorus-containing groups CC
GO:0065007 biological regulation BP
GO:0097159 organic cyclic compound binding MF
GO:1901363 heterocyclic compound binding MF
GO:1902494 catalytic complex CC
GO:1990234 transferase complex CC