Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
CKAN_00883700.v3
View in Genome Browser
Position
CKAN.scaff0003:50312410-50313561 (-)
1151bp
Gene Type
gene
Gene Description (Protein Product)
GDP-mannose 4;6 dehydratase
Organism
Cinnamomum kanehirae
Also AS AT3G51160

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
CKAN_02045900.v3 GDP-L-fucose synthase
CKAN_02313300.v3 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3)
CKAN_02495600.v3 dolichol-phosphate mannosyltransferase
Regulatory gene
CKAN_00586900.v3 ethylene-responsive transcription factor
CKAN_00680700.v3 transcription factor
CKAN_00760000.v3 B3 domain-containing

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000902 cell morphogenesis BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006793 phosphorus metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008446 GDP-mannose 4,6-dehydratase activity MF
GO:0009058 biosynthetic process BP
GO:0009225 nucleotide-sugar metabolic process BP
GO:0009226 nucleotide-sugar biosynthetic process BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009826 unidimensional cell growth BP
GO:0009987 cellular process BP
GO:0016043 cellular component organization BP
GO:0016049 cell growth BP
GO:0016829 lyase activity MF
GO:0016835 carbon-oxygen lyase activity MF
GO:0016836 hydro-lyase activity MF
GO:0018130 heterocycle biosynthetic process BP
GO:0019438 aromatic compound biosynthetic process BP
GO:0032502 developmental process BP
GO:0032989 cellular component morphogenesis BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034654 nucleobase-containing compound biosynthetic process BP
GO:0040007 growth BP
GO:0042350 GDP-L-fucose biosynthetic process BP
GO:0042351 'de novo' GDP-L-fucose biosynthetic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046368 GDP-L-fucose metabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0048589 developmental growth BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0055086 nucleobase-containing small molecule metabolic process BP
GO:0060560 developmental growth involved in morphogenesis BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:1901135 carbohydrate derivative metabolic process BP
GO:1901137 carbohydrate derivative biosynthetic process BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
KEGG Term Name Description
map01100 Metabolic pathways -
map00520 Amino sugar and nucleotide sugar metabolism -
map00051 Fructose and mannose metabolism -