PPGR - Gene Detail

Basic Information

Gene ID	CKAN_00964500.v3 View in Genome Browser
Position	CKAN.scaff0003:68295370-68320944 (+) 25574bp
Gene Type	gene
Gene Description (Protein Product)	D-2-hydroxyglutarate dehydrogenase
Organism	Cinnamomum kanehirae
Also AS	AT4G36400

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

CKAN_01641800.v3 protein Sb04g004280 source

CKAN_02017100.v3 Ubiquitin exists either covalently attached to another protein; or free (unanchored). When covalently bound; it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin); a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains; when attached to a target protein; have different functions depending on the Lys residue of the ubiquitin that is linked

CKAN_02268700.v3 Ubiquitin exists either covalently attached to another protein; or free (unanchored). When covalently bound; it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin); a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains; when attached to a target protein; have different functions depending on the Lys residue of the ubiquitin that is linked

Regulatory gene

CKAN_00109600.v3 MADS-box protein

CKAN_00224200.v3 AP2-like ethylene-responsive transcription factor

CKAN_00283400.v3 MADS-box protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000166	nucleotide binding	MF
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004457	lactate dehydrogenase activity	MF
GO:0004458	D-lactate dehydrogenase (cytochrome) activity	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005739	mitochondrion	CC
GO:0006082	organic acid metabolic process	BP
GO:0006089	lactate metabolic process	BP
GO:0006091	generation of precursor metabolites and energy	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009853	photorespiration	BP
GO:0009987	cellular process	BP
GO:0015980	energy derivation by oxidation of organic compounds	BP
GO:0016491	oxidoreductase activity	MF
GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	MF
GO:0016898	oxidoreductase activity, acting on the CH-OH group of donors, cytochrome as acceptor	MF
GO:0019516	lactate oxidation	BP
GO:0019752	carboxylic acid metabolic process	BP
GO:0022900	electron transport chain	BP
GO:0022904	respiratory electron transport chain	BP
GO:0032787	monocarboxylic acid metabolic process	BP
GO:0036094	small molecule binding	MF
GO:0043094	cellular metabolic compound salvage	BP
GO:0043167	ion binding	MF
GO:0043168	anion binding	MF
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043436	oxoacid metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0045333	cellular respiration	BP
GO:0047545	2-hydroxyglutarate dehydrogenase activity	MF
GO:0048037	obsolete cofactor binding	MF
GO:0050660	flavin adenine dinucleotide binding	MF
GO:0050662	obsolete coenzyme binding	MF
GO:0051990	(R)-2-hydroxyglutarate dehydrogenase activity	MF
GO:0055114	obsolete oxidation-reduction process	BP
GO:0071704	organic substance metabolic process	BP
GO:0071949	FAD binding	MF
GO:0097159	organic cyclic compound binding	MF
GO:1901265	nucleoside phosphate binding	MF
GO:1901363	heterocyclic compound binding	MF
GO:1901615	organic hydroxy compound metabolic process	BP