Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Basic Information
Gene ID
CKAN_01007100.v3
View in Genome Browser
Position
CKAN.scaff0003:75177249-75182936 (-)
5687bp
Gene Type
gene
Gene Description (Protein Product)
RecQ-mediated genome instability protein
Organism
Cinnamomum kanehirae
Also AS AT1G08390

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
CKAN_01967100.v3 Fanconi anemia group J protein
CKAN_01585200.v3 Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme; resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand
CKAN_02488500.v3 DNA repair protein RAD51 homolog
Regulatory gene
CKAN_00053400.v3 Protein SENSITIVE TO PROTON RHIZOTOXICITY
CKAN_00082000.v3 ZINC FINGER protein
CKAN_00090300.v3 Zinc finger AN1 and C2H2 domain-containing stress-associated protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail