PPGR - Gene Detail

Basic Information

Gene ID	CKAN_01297400.v3 View in Genome Browser
Position	CKAN.scaff0005:4098308-4107210 (-) 8902bp
Gene Type	gene
Gene Description (Protein Product)	TOM1-like protein 2
Organism	Cinnamomum kanehirae
Also AS	AT5G63640

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

CKAN_01641800.v3 protein Sb04g004280 source

CKAN_02017100.v3 Ubiquitin exists either covalently attached to another protein; or free (unanchored). When covalently bound; it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin); a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains; when attached to a target protein; have different functions depending on the Lys residue of the ubiquitin that is linked

CKAN_02268700.v3 Ubiquitin exists either covalently attached to another protein; or free (unanchored). When covalently bound; it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin); a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains; when attached to a target protein; have different functions depending on the Lys residue of the ubiquitin that is linked

Regulatory gene

CKAN_00109600.v3 MADS-box protein

CKAN_00283400.v3 MADS-box protein

CKAN_00958800.v3 MADS-box protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005623	obsolete cell	CC
GO:0005886	plasma membrane	CC
GO:0016020	membrane	CC
GO:0044464	obsolete cell part	CC
GO:0071944	cell periphery	CC