Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
CKAN_01382200.v3
View in Genome Browser
Position
CKAN.scaff0005:23351355-23357962 (-)
6607bp
Gene Type
gene
Gene Description (Protein Product)
biogenesis of lysosome-related organelles complex 1 subunit
Organism
Cinnamomum kanehirae
Also AS AT5G49550

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
CKAN_02653500.v3 sorting nexin
CKAN_02443600.v3 Sodium hydrogen exchanger
CKAN_02391100.v3 PHD and RING finger domain-containing protein
Regulatory gene
CKAN_00109600.v3 MADS-box protein
CKAN_00136200.v3 NAC transcription factor
CKAN_00224200.v3 AP2-like ethylene-responsive transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0016491 oxidoreductase activity MF
GO:0031082 BLOC complex CC
GO:0031083 BLOC-1 complex CC
GO:0032991 protein-containing complex CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044445 obsolete cytosolic part CC
GO:0044464 obsolete cell part CC
GO:0055114 obsolete oxidation-reduction process BP