PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Pathway

Basic Information

Gene ID	CKAN_01564400.v3 View in Genome Browser
Position	CKAN.scaff0006:21356367-21360027 (+) 3660bp
Gene Type	gene
Gene Description (Protein Product)	The H protein shuttles the methylamine group of glycine from the P protein to the T protein
Organism	Cinnamomum kanehirae
Also AS	AT1G32470

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	CKAN_02335500.v3 aminotransferase CKAN_02295400.v3 glutamine synthetase CKAN_01641800.v3 protein Sb04g004280 source
Regulatory gene	CKAN_00109600.v3 MADS-box protein CKAN_00224200.v3 AP2-like ethylene-responsive transcription factor CKAN_00283400.v3 MADS-box protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005737	cytoplasm	CC
GO:0005739	mitochondrion	CC
GO:0009507	chloroplast	CC
GO:0009536	plastid	CC
GO:0009579	thylakoid	CC
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00630	Glyoxylate and dicarboxylate metabolism	-
map00260	Glycine, serine and threonine metabolism	Serine is derived from 3-phospho-D-glycerate, an intermediate of glycolysis [MD:M00020], and glycine is derived from serine. Threonine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, threonine is derived from aspartate [MD:M00018].