PPGR - Gene Detail

Gene ID	CKAN_01604900.v3 View in Genome Browser
Position	CKAN.scaff0006:28050646-28055372 (+) 4726bp
Gene Type	gene
Gene Description (Protein Product)	NnrU protein
Organism	Cinnamomum kanehirae
Also AS	AT1G10830

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)	CKAN_01786100.v3 Lycopene epsilon cyclase CKAN_02178300.v3 Converts zeaxanthin into antheraxanthin and subsequently violaxanthin CKAN_02325900.v3 1-deoxy-D-xylulose 5-phosphate reductoisomerase
Regulatory gene	CKAN_00109600.v3 MADS-box protein CKAN_00283400.v3 MADS-box protein CKAN_00958800.v3 MADS-box protein

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Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0006629	lipid metabolic process	BP
GO:0006720	isoprenoid metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008299	isoprenoid biosynthetic process	BP
GO:0008610	lipid biosynthetic process	BP
GO:0009058	biosynthetic process	BP
GO:0009507	chloroplast	CC
GO:0009536	plastid	CC
GO:0009987	cellular process	BP
GO:0016119	carotene metabolic process	BP
GO:0016120	carotene biosynthetic process	BP
GO:0016853	isomerase activity	MF
GO:0016859	cis-trans isomerase activity	MF
GO:0042214	terpene metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044255	cellular lipid metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0046246	terpene biosynthetic process	BP
GO:0071704	organic substance metabolic process	BP
GO:0090471	9,15,9'-tri-cis-zeta-carotene isomerase activity	MF
GO:1901576	organic substance biosynthetic process	BP

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00906	Carotenoid biosynthesis	-