PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Pathway

Basic Information

Gene ID	CKAN_01976100.v3 View in Genome Browser
Position	CKAN.scaff0008:14007150-14015698 (-) 8548bp
Gene Type	gene
Gene Description (Protein Product)	Nucleoside diphosphate kinase
Organism	Cinnamomum kanehirae
Also AS	AT4G23900

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

CKAN_02313500.v3 Deoxyuridine 5'-triphosphate

CKAN_02627500.v3 Belongs to the adenylate kinase family

CKAN_02547600.v3 Pyrophosphatase that hydrolyzes non-canonical purine nucleotides such as inosine triphosphate (ITP); deoxyinosine triphosphate (dITP) or xanthosine 5'-triphosphate (XTP) to their respective monophosphate derivatives. The enzyme does not distinguish between the deoxy- and ribose forms. Probably excludes non-canonical purines from RNA and DNA precursor pools; thus preventing their incorporation into RNA and DNA and avoiding chromosomal lesions

Regulatory gene

CKAN_01480100.v3 Protein BASIC PENTACYSTEINE6-like

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004550	nucleoside diphosphate kinase activity	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005739	mitochondrion	CC
GO:0005740	mitochondrial envelope	CC
GO:0005743	mitochondrial inner membrane	CC
GO:0005758	mitochondrial intermembrane space	CC
GO:0006139	nucleobase-containing compound metabolic process	BP
GO:0006165	nucleoside diphosphate phosphorylation	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006753	nucleoside phosphate metabolic process	BP
GO:0006793	phosphorus metabolic process	BP
GO:0006796	phosphate-containing compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006950	response to stress	BP
GO:0006979	response to oxidative stress	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008270	zinc ion binding	MF
GO:0009117	nucleotide metabolic process	BP
GO:0009132	nucleoside diphosphate metabolic process	BP
GO:0009507	chloroplast	CC
GO:0009534	chloroplast thylakoid	CC
GO:0009536	plastid	CC
GO:0009543	chloroplast thylakoid lumen	CC
GO:0009579	thylakoid	CC
GO:0009987	cellular process	BP
GO:0016020	membrane	CC
GO:0016301	kinase activity	MF
GO:0016310	phosphorylation	BP
GO:0016740	transferase activity	MF
GO:0016772	transferase activity, transferring phosphorus-containing groups	MF
GO:0016776	phosphotransferase activity, phosphate group as acceptor	MF
GO:0019205	nucleobase-containing compound kinase activity	MF
GO:0019637	organophosphate metabolic process	BP
GO:0019866	organelle inner membrane	CC
GO:0031090	organelle membrane	CC
GO:0031966	mitochondrial membrane	CC
GO:0031967	organelle envelope	CC
GO:0031970	organelle envelope lumen	CC
GO:0031974	membrane-enclosed lumen	CC
GO:0031975	envelope	CC
GO:0031976	plastid thylakoid	CC
GO:0031977	thylakoid lumen	CC
GO:0031978	plastid thylakoid lumen	CC
GO:0031984	organelle subcompartment	CC
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0043167	ion binding	MF
GO:0043169	cation binding	MF
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043233	organelle lumen	CC
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044429	obsolete mitochondrial part	CC
GO:0044434	obsolete chloroplast part	CC
GO:0044435	obsolete plastid part	CC
GO:0044436	obsolete thylakoid part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0046483	heterocycle metabolic process	BP
GO:0046872	metal ion binding	MF
GO:0046914	transition metal ion binding	MF
GO:0046939	nucleotide phosphorylation	BP
GO:0050896	response to stimulus	BP
GO:0050897	cobalt ion binding	MF
GO:0055086	nucleobase-containing small molecule metabolic process	BP
GO:0070013	intracellular organelle lumen	CC
GO:0071704	organic substance metabolic process	BP
GO:1901360	organic cyclic compound metabolic process	BP

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00240	Pyrimidine metabolism	-
map00230	Purine metabolism	-