PPGR - Gene Detail

Basic Information

Gene ID	CKAN_02116800.v3 View in Genome Browser
Position	CKAN.scaff0009:10583838-10589172 (-) 5334bp
Gene Type	gene
Gene Description (Protein Product)	protein At3g15000; mitochondrial-like
Organism	Cinnamomum kanehirae
Also AS	AT3G15000

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

CKAN_02372400.v3 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX

CKAN_02281300.v3 DAG protein

CKAN_02460300.v3 protein At3g15000; mitochondrial-like

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000959	mitochondrial RNA metabolic process	BP
GO:0003674	molecular_function	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005739	mitochondrion	CC
GO:0006139	nucleobase-containing compound metabolic process	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009451	RNA modification	BP
GO:0009507	chloroplast	CC
GO:0009536	plastid	CC
GO:0009987	cellular process	BP
GO:0016070	RNA metabolic process	BP
GO:0016071	mRNA metabolic process	BP
GO:0016553	base conversion or substitution editing	BP
GO:0016554	cytidine to uridine editing	BP
GO:0016556	mRNA modification	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0043167	ion binding	MF
GO:0043169	cation binding	MF
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043412	macromolecule modification	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0046483	heterocycle metabolic process	BP
GO:0046872	metal ion binding	MF
GO:0046914	transition metal ion binding	MF
GO:0050897	cobalt ion binding	MF
GO:0071704	organic substance metabolic process	BP
GO:0080156	mitochondrial mRNA modification	BP
GO:0090304	nucleic acid metabolic process	BP
GO:1900864	mitochondrial RNA modification	BP
GO:1901360	organic cyclic compound metabolic process	BP