PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Pathway

Basic Information

Gene ID	gene-CKAN_01052300 View in Genome Browser
Position	QPKB01000004.1:4003880-4016172 (+) 12292bp
Gene Type	gene
Gene Description (Protein Product)	"beta-1
Organism	Cinnamomum micranthum
Also AS	AT4G21060

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	gene-CKAN_01176000 glycosyltransferase gene-CKAN_02049900 Xyloglucan glycosyltransferase gene-CKAN_01804700 galactoside
Regulatory gene	gene-CKAN_00109600 MADS-box protein gene-CKAN_00139800 transcription factor gene-CKAN_00180600 transcription factor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005783	endoplasmic reticulum	CC
GO:0005794	Golgi apparatus	CC
GO:0006029	proteoglycan metabolic process	BP
GO:0006464	protein modification process	BP
GO:0006486	protein glycosylation	BP
GO:0006493	protein O-linked glycosylation	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0007275	multicellular organism development	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008378	galactosyltransferase activity	MF
GO:0009058	biosynthetic process	BP
GO:0009059	macromolecule biosynthetic process	BP
GO:0009100	glycoprotein metabolic process	BP
GO:0009101	glycoprotein biosynthetic process	BP
GO:0009653	anatomical structure morphogenesis	BP
GO:0009888	tissue development	BP
GO:0009987	cellular process	BP
GO:0010015	root morphogenesis	BP
GO:0010053	root epidermal cell differentiation	BP
GO:0010054	trichoblast differentiation	BP
GO:0010384	cell wall proteoglycan metabolic process	BP
GO:0010404	cell wall hydroxyproline-rich glycoprotein metabolic process	BP
GO:0010405	arabinogalactan protein metabolic process	BP
GO:0012505	endomembrane system	CC
GO:0016740	transferase activity	MF
GO:0016757	glycosyltransferase activity	MF
GO:0016758	hexosyltransferase activity	MF
GO:0018193	peptidyl-amino acid modification	BP
GO:0018208	peptidyl-proline modification	BP
GO:0018258	protein O-linked glycosylation via hydroxyproline	BP
GO:0019538	protein metabolic process	BP
GO:0021700	developmental maturation	BP
GO:0022622	root system development	BP
GO:0030154	cell differentiation	BP
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0034645	cellular macromolecule biosynthetic process	BP
GO:0036211	protein modification process	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043412	macromolecule modification	BP
GO:0043413	macromolecule glycosylation	BP
GO:0044036	cell wall macromolecule metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044267	protein metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0048364	root development	BP
GO:0048468	cell development	BP
GO:0048469	cell maturation	BP
GO:0048731	system development	BP
GO:0048764	trichoblast maturation	BP
GO:0048765	root hair cell differentiation	BP
GO:0048856	anatomical structure development	BP
GO:0048869	cellular developmental process	BP
GO:0070085	glycosylation	BP
GO:0071554	cell wall organization or biogenesis	BP
GO:0071695	anatomical structure maturation	BP
GO:0071704	organic substance metabolic process	BP
GO:0080147	root hair cell development	BP
GO:0090558	plant epidermis development	BP
GO:0090627	plant epidermal cell differentiation	BP
GO:0099402	plant organ development	BP
GO:1901135	carbohydrate derivative metabolic process	BP
GO:1901137	carbohydrate derivative biosynthetic process	BP
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901566	organonitrogen compound biosynthetic process	BP
GO:1901576	organic substance biosynthetic process	BP
GO:1905392	plant organ morphogenesis	BP
GO:1990714	hydroxyproline O-galactosyltransferase activity	MF