Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
gene-CKAN_01602900
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Position
QPKB01000006.1:27716464-27727586 (+)
11122bp
Gene Type
gene
Gene Description (Protein Product)
Small ubiquitin-related modifier
Organism
Cinnamomum micranthum
Also AS AT4G26840

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-CKAN_01679700 Helicase associated domain (HA2) Add an annotation
gene-CKAN_02264500 The glycine cleavage system catalyzes the degradation of glycine
gene-CKAN_02403600 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
Regulatory gene
gene-CKAN_00139800 transcription factor
gene-CKAN_00180600 transcription factor
gene-CKAN_00318100 Transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Pathway
KEGG Term Name Description
map03013 RNA transport RNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) via mobile export receptors. The majority of RNAs, such as tRNAs, rRNAs, and U snRNAs, are transported by specific export receptors, which belong to the karyopherin-beta family proteins. A feature of karyopherins is their regulation by the small GTPase Ran. However, general mRNA export is mechanistically different. Nuclear export of mRNAs is functionally coupled to different steps in gene expression processes, such as transcription, splicing, 3'-end formation and even translation.