PPGR - Gene Detail

Basic Information

Gene ID	gene-CKAN_02144900 View in Genome Browser
Position	QPKB01000009.1:27971675-27991663 (+) 19988bp
Gene Type	gene
Gene Description (Protein Product)	Cysteine desulfurase
Organism	Cinnamomum micranthum
Also AS	AT1G08490

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-CKAN_02305300 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family

gene-CKAN_02274000 Ubiquitin-like domain

gene-CKAN_02336800 Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic 2Fe-2S and 4Fe-4S proteins

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0001887	selenium compound metabolic process	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0006464	protein modification process	BP
GO:0006790	sulfur compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009000	selenocysteine lyase activity	MF
GO:0009507	chloroplast	CC
GO:0009536	plastid	CC
GO:0009987	cellular process	BP
GO:0010035	response to inorganic substance	BP
GO:0010269	response to selenium ion	BP
GO:0016043	cellular component organization	BP
GO:0016226	iron-sulfur cluster assembly	BP
GO:0016740	transferase activity	MF
GO:0016782	transferase activity, transferring sulphur-containing groups	MF
GO:0016783	sulfurtransferase activity	MF
GO:0016829	lyase activity	MF
GO:0016846	carbon-sulfur lyase activity	MF
GO:0018282	metal incorporation into metallo-sulfur cluster	BP
GO:0018283	iron incorporation into metallo-sulfur cluster	BP
GO:0019538	protein metabolic process	BP
GO:0022607	cellular component assembly	BP
GO:0031071	cysteine desulfurase activity	MF
GO:0031163	metallo-sulfur cluster assembly	BP
GO:0036211	protein modification process	BP
GO:0042221	response to chemical	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043412	macromolecule modification	BP
GO:0044085	cellular component biogenesis	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044267	protein metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0050896	response to stimulus	BP
GO:0051186	obsolete cofactor metabolic process	BP
GO:0071704	organic substance metabolic process	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:1901564	organonitrogen compound metabolic process	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00450	Selenocompound metabolism	-