PPGR - Gene Detail

Basic Information

Gene ID	gene-CKAN_02335500 View in Genome Browser
Position	QPKB01000010.1:34780103-34798323 (+) 18220bp
Gene Type	gene
Gene Description (Protein Product)	aminotransferase
Organism	Cinnamomum micranthum
Also AS	AT1G70580

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-CKAN_02506900 Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q)

gene-CKAN_02485300 Isocitrate dehydrogenase NAD

gene-CKAN_02570000 Aspartate aminotransferase

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0001666	response to hypoxia	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004021	L-alanine:2-oxoglutarate aminotransferase activity	MF
GO:0005575	cellular_component	CC
GO:0005576	extracellular region	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005773	vacuole	CC
GO:0005777	peroxisome	CC
GO:0006950	response to stress	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008453	alanine-glyoxylate transaminase activity	MF
GO:0008483	transaminase activity	MF
GO:0009507	chloroplast	CC
GO:0009532	plastid stroma	CC
GO:0009536	plastid	CC
GO:0009570	chloroplast stroma	CC
GO:0009628	response to abiotic stimulus	BP
GO:0009853	photorespiration	BP
GO:0009987	cellular process	BP
GO:0016020	membrane	CC
GO:0016740	transferase activity	MF
GO:0016769	transferase activity, transferring nitrogenous groups	MF
GO:0036293	response to decreased oxygen levels	BP
GO:0042579	microbody	CC
GO:0043094	cellular metabolic compound salvage	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044237	cellular metabolic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044434	obsolete chloroplast part	CC
GO:0044435	obsolete plastid part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0047635	alanine-oxo-acid transaminase activity	MF
GO:0047958	glycine:2-oxoglutarate aminotransferase activity	MF
GO:0048046	apoplast	CC
GO:0050896	response to stimulus	BP
GO:0070482	response to oxygen levels	BP

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00710	Carbon fixation in photosynthetic organisms	-
map00630	Glyoxylate and dicarboxylate metabolism	-
map00260	Glycine, serine and threonine metabolism	Serine is derived from 3-phospho-D-glycerate, an intermediate of glycolysis [MD:M00020], and glycine is derived from serine. Threonine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, threonine is derived from aspartate [MD:M00018].
map00250	Alanine, aspartate and glutamate metabolism	-