PPGR - Gene Detail

Basic Information

Gene ID	gene-CKAN_02441900 View in Genome Browser
Position	QPKB01000011.1:22658120-22658629 (-) 509bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the small GTPase superfamily. Arf family
Organism	Cinnamomum micranthum
Also AS	AT2G18390

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-CKAN_02508000 Ribosomal protein L27

gene-CKAN_02490700 Regulatory subunit of the dimeric E1 enzyme. E1 activates RUB1 NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a RUB1-ECR1 thioester and free AMP. E1 finally transfers RUB1 to the catalytic cysteine of RCE1

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000003	reproduction	BP
GO:0000166	nucleotide binding	MF
GO:0001882	nucleoside binding	MF
GO:0001883	purine nucleoside binding	MF
GO:0003006	developmental process involved in reproduction	BP
GO:0003674	molecular_function	MF
GO:0005488	binding	MF
GO:0005525	GTP binding	MF
GO:0007021	tubulin complex assembly	BP
GO:0007275	multicellular organism development	BP
GO:0007349	cellularization	BP
GO:0008150	biological_process	BP
GO:0009553	embryo sac development	BP
GO:0009558	embryo sac cellularization	BP
GO:0009561	megagametogenesis	BP
GO:0009653	anatomical structure morphogenesis	BP
GO:0009790	embryo development	BP
GO:0009791	post-embryonic development	BP
GO:0009793	embryo development ending in seed dormancy	BP
GO:0009888	tissue development	BP
GO:0009960	endosperm development	BP
GO:0009987	cellular process	BP
GO:0010154	fruit development	BP
GO:0016043	cellular component organization	BP
GO:0017076	purine nucleotide binding	MF
GO:0019001	guanyl nucleotide binding	MF
GO:0022414	reproductive process	BP
GO:0022607	cellular component assembly	BP
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0032549	ribonucleoside binding	MF
GO:0032550	purine ribonucleoside binding	MF
GO:0032553	ribonucleotide binding	MF
GO:0032555	purine ribonucleotide binding	MF
GO:0032561	guanyl ribonucleotide binding	MF
GO:0034622	protein-containing complex assembly	BP
GO:0035639	purine ribonucleoside triphosphate binding	MF
GO:0036094	small molecule binding	MF
GO:0043167	ion binding	MF
GO:0043168	anion binding	MF
GO:0043933	protein-containing complex organization	BP
GO:0044085	cellular component biogenesis	BP
GO:0048229	gametophyte development	BP
GO:0048316	seed development	BP
GO:0048608	reproductive structure development	BP
GO:0048646	anatomical structure formation involved in morphogenesis	BP
GO:0048731	system development	BP
GO:0048856	anatomical structure development	BP
GO:0061458	reproductive system development	BP
GO:0065003	protein-containing complex assembly	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0097159	organic cyclic compound binding	MF
GO:0097367	carbohydrate derivative binding	MF
GO:1901265	nucleoside phosphate binding	MF
GO:1901363	heterocyclic compound binding	MF