Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
Ciclev10000672m.g.v1.0
View in Genome Browser
Position
scaffold_5:5328723-5334079 (-)
5356bp
Gene Type
gene
Gene Description (Protein Product)
Bromodomain-containing protein
Organism
Citrus clementina
Also AS AT1G58025CICLE_v10000672mg

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ciclev10016632m.g.v1.0 Transcription initiation factor TFIID subunit
Ciclev10010421m.g.v1.0 Histone-lysine n-methyltransferase
Ciclev10004115m.g.v1.0 Chromatin structure-remodeling complex protein
Regulatory gene
Ciclev10000225m.g.v1.0 B3 domain-containing
Ciclev10000850m.g.v1.0 Protein SENSITIVE TO PROTON RHIZOTOXICITY
Ciclev10000881m.g.v1.0 B3 domain-containing protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0001047 core promoter sequence-specific DNA binding MF
GO:0001067 transcription regulatory region nucleic acid binding MF
GO:0001085 RNA polymerase II-specific DNA-binding transcription factor binding MF
GO:0001091 RNA polymerase II general transcription initiation factor binding MF
GO:0001094 TFIID-class transcription factor complex binding MF
GO:0001098 basal transcription machinery binding MF
GO:0001099 basal RNA polymerase II transcription machinery binding MF
GO:0001672 regulation of chromatin organization BP
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0008134 transcription factor binding MF
GO:0008150 biological_process BP
GO:0010639 negative regulation of organelle organization BP
GO:0010847 obsolete regulation of chromatin assembly BP
GO:0031445 regulation of heterochromatin formation BP
GO:0031452 negative regulation of heterochromatin formation BP
GO:0033043 regulation of organelle organization BP
GO:0033044 regulation of chromosome organization BP
GO:0042393 histone binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044087 regulation of cellular component biogenesis BP
GO:0044212 transcription cis-regulatory region binding MF
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0045798 negative regulation of chromatin organization BP
GO:0048519 negative regulation of biological process BP
GO:0048523 negative regulation of cellular process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0051128 regulation of cellular component organization BP
GO:0051129 negative regulation of cellular component organization BP
GO:0065007 biological regulation BP
GO:0070577 lysine-acetylated histone binding MF
GO:0097159 organic cyclic compound binding MF
GO:0140030 modification-dependent protein binding MF
GO:0140033 acetylation-dependent protein binding MF
GO:1901363 heterocyclic compound binding MF
GO:1902275 regulation of chromatin organization BP
GO:1905268 negative regulation of chromatin organization BP
GO:2001251 negative regulation of chromosome organization BP