Basic Information
Gene ID
Ciclev10007378m.g.v1.0
Position
scaffold_1:5539851-5542980 (+)
3129bp
Gene Type
gene
Gene Description (Protein Product)
Pre-mRNA-splicing factor ATP-dependent RNA
Organism
Also AS AT3G26560CICLE_v10007378mg

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ciclev10030826m.g.v1.0 ATP-dependent RNA helicase
Ciclev10017283m.g.v1.0 Small ubiquitin-related modifier
Ciclev10022993m.g.v1.0 Small ubiquitin-related modifier
Regulatory gene
Ciclev10001730m.g.v1.0 transcription factor
Ciclev10002179m.g.v1.0 dof zinc finger protein
Ciclev10002237m.g.v1.0 dof zinc finger protein

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.