Basic Information
Gene ID
Ciclev10017476m.g.v1.0
Position
scaffold_2:19640281-19644634 (+)
4353bp
Gene Type
gene
Gene Description (Protein Product)
Cyclic nucleotide-gated ion channel 1-like
Organism
Also AS AT5G53130CICLE_v10017476mg

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ciclev10026978m.g.v1.0 Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Ciclev10024610m.g.v1.0 Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Ciclev10030526m.g.v1.0 Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Regulatory gene
Ciclev10000756m.g.v1.0 Transcription factor
Ciclev10000850m.g.v1.0 Protein SENSITIVE TO PROTON RHIZOTOXICITY
Ciclev10000982m.g.v1.0 zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map04626 Plant-pathogen interaction Plants lack animal-like adaptive immunity mechanisms, and therefore have evolved a specific system with multiple layers against invading pathogens. The primary response includes the perception of pathogens by cell-surface pattern-recognition receptors (PRRs) and is referred to as PAMP-triggered immunity (PTI). Activation of FLS2 and EFR triggers MAPK signaling pathway that activates defense genes for antimictobial compounds. The increase in the cytosolic Ca2+ concentration is also a regulator for production of reactive oxygen species and localized programmed cell death/hypersensitive response. The secondary response is called effector-triggered immunity (ETI). Pathogens can acquire the ability to suppress PTI by directly injecting effector proteins into the plant cell through secretion systems. In addition, pathogens can manipulate plant hormone signaling pathways to evade host immune responses using coronatine toxin. Some plants possess specific intracellular surveillance proteins (R proteins) to monitor the presence of pathogen virulence proteins. This ETI occurs with localized programmed cell death to arrest pathogen growth, resulting in cultivar-specific disease resistance.