Basic Information
Gene ID
Ciclev10020501m.g.v1.0
Position
scaffold_3:5972288-5978062 (+)
5774bp
Gene Type
gene
Gene Description (Protein Product)
Transaldolase
Organism
Also AS AT1G12230CICLE_v10020501mg

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ciclev10029093m.g.v1.0 Pyridoxal biosynthesis protein
Ciclev10021269m.g.v1.0 Belongs to the glucose-6-phosphate 1-epimerase family
Ciclev10031662m.g.v1.0 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
Regulatory gene
Ciclev10000454m.g.v1.0 Trihelix transcription factor
Ciclev10000593m.g.v1.0 Trihelix transcription factor
Ciclev10000627m.g.v1.0 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00030 Pentose phosphate pathway The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].