Basic Information
Gene ID
Ciclev10021673m.g.v1.0
Position
scaffold_3:47908878-47912289 (+)
3411bp
Gene Type
gene
Gene Description (Protein Product)
splicing factor
Organism
Also AS AT3G61860CICLE_v10021673mg

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ciclev10028143m.g.v1.0 SRSF protein kinase
Ciclev10028130m.g.v1.0 SRSF protein kinase
Ciclev10025502m.g.v1.0 U1 small nuclear ribonucleoprotein 70
Regulatory gene
Ciclev10000225m.g.v1.0 B3 domain-containing
Ciclev10000454m.g.v1.0 Trihelix transcription factor
Ciclev10000593m.g.v1.0 Trihelix transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.